Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.75■□□□□ 0.43
CTNNA1P35221 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CTNNA1P35221 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CTNNA1P35221 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTNNA1P35221 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CTNNA1P35221 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTNNA1P35221 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.74■□□□□ 0.43
CTNNA1P35221 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.74■□□□□ 0.43
CTNNA1P35221 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.74■□□□□ 0.43
CTNNA1P35221 AC013467.2-201ENST00000605472 835 ntBASIC17.74■□□□□ 0.43
CTNNA1P35221 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CTNNA1P35221 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.74■□□□□ 0.43
CTNNA1P35221 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.74■□□□□ 0.43
CTNNA1P35221 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CTNNA1P35221 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 AC006277.1-201ENST00000624348 1610 ntBASIC17.73■□□□□ 0.43
CTNNA1P35221 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNNA1P35221 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.73■□□□□ 0.43
CTNNA1P35221 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTNNA1P35221 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.73■□□□□ 0.43
CTNNA1P35221 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNNA1P35221 AL139011.1-202ENST00000642063 584 ntBASIC17.73■□□□□ 0.43
CTNNA1P35221 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CTNNA1P35221 AL513477.1-201ENST00000602865 2407 ntBASIC17.73■□□□□ 0.43
CTNNA1P35221 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.73■□□□□ 0.43
CTNNA1P35221 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 ME2P1-201ENST00000426028 1970 ntBASIC17.73■□□□□ 0.43
CTNNA1P35221 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.73■□□□□ 0.43
CTNNA1P35221 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CTNNA1P35221 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
CTNNA1P35221 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.72■□□□□ 0.43
CTNNA1P35221 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 KRT16P4-201ENST00000453883 522 ntBASIC17.72■□□□□ 0.43
CTNNA1P35221 BX005266.1-201ENST00000473402 457 ntBASIC17.72■□□□□ 0.43
CTNNA1P35221 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.72■□□□□ 0.43
CTNNA1P35221 AC106795.1-205ENST00000512851 1056 ntBASIC17.72■□□□□ 0.43
CTNNA1P35221 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.72■□□□□ 0.43
CTNNA1P35221 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.72■□□□□ 0.43
CTNNA1P35221 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CTNNA1P35221 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CTNNA1P35221 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms