Protein–RNA interactions for Protein: P31941

APOBEC3A, DNA dC->dU-editing enzyme APOBEC-3A, humanhuman

Predicted RBP Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3AP31941 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC3AP31941 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBEC3AP31941 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
APOBEC3AP31941 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 LINC00895-201ENST00000629028 1637 ntBASIC14.24□□□□□ -0.13
APOBEC3AP31941 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 MIR346-201ENST00000362234 95 ntBASIC14.24□□□□□ -0.13
APOBEC3AP31941 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 AC069262.1-201ENST00000539058 672 ntBASIC14.24□□□□□ -0.13
APOBEC3AP31941 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 AP000842.3-202ENST00000569238 1080 ntBASIC14.24□□□□□ -0.13
APOBEC3AP31941 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 Z92544.3-201ENST00000624747 417 ntBASIC14.24□□□□□ -0.13
APOBEC3AP31941 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.24□□□□□ -0.13
APOBEC3AP31941 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBEC3AP31941 C8orf49-201ENST00000525043 1968 ntBASIC14.23□□□□□ -0.13
APOBEC3AP31941 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 SLC25A39P2-201ENST00000537614 270 ntBASIC14.23□□□□□ -0.13
APOBEC3AP31941 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AC011467.4-201ENST00000594891 528 ntBASIC14.23□□□□□ -0.13
APOBEC3AP31941 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 KRT8P39-201ENST00000396270 1433 ntBASIC14.23□□□□□ -0.13
APOBEC3AP31941 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
APOBEC3AP31941 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.23□□□□□ -0.13
APOBEC3AP31941 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
APOBEC3AP31941 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
APOBEC3AP31941 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms