Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A4P31645 TSEN15P1-201ENST00000423257 515 ntBASIC17.13■□□□□ 0.33
SLC6A4P31645 FAM58DP-201ENST00000428076 619 ntBASIC17.13■□□□□ 0.33
SLC6A4P31645 AC005237.2-201ENST00000434368 219 ntBASIC17.13■□□□□ 0.33
SLC6A4P31645 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.13■□□□□ 0.33
SLC6A4P31645 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.13■□□□□ 0.33
SLC6A4P31645 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC6A4P31645 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
SLC6A4P31645 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 AC106886.4-201ENST00000623557 2502 ntBASIC17.13■□□□□ 0.33
SLC6A4P31645 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC6A4P31645 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC17.12■□□□□ 0.33
SLC6A4P31645 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A4P31645 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A4P31645 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A4P31645 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.12■□□□□ 0.33
SLC6A4P31645 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
SLC6A4P31645 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 OR6D1P-202ENST00000641007 5290 ntBASIC17.12■□□□□ 0.33
SLC6A4P31645 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A4P31645 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A4P31645 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A4P31645 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SLC6A4P31645 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SLC6A4P31645 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.12■□□□□ 0.33
SLC6A4P31645 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SLC6A4P31645 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SLC6A4P31645 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A4P31645 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A4P31645 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A4P31645 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 AC109322.1-201ENST00000524499 1264 ntBASIC17.11■□□□□ 0.33
SLC6A4P31645 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 AC027307.2-201ENST00000591252 911 ntBASIC17.11■□□□□ 0.33
SLC6A4P31645 AC009093.7-201ENST00000623853 1223 ntBASIC17.11■□□□□ 0.33
SLC6A4P31645 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.11■□□□□ 0.33
SLC6A4P31645 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SLC6A4P31645 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
SLC6A4P31645 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SLC6A4P31645 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.11■□□□□ 0.33
SLC6A4P31645 AL031731.1-201ENST00000642131 2094 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms