Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 MYCLP2-201ENST00000449268 967 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 AL589987.1-201ENST00000453380 819 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 ELK1P1-201ENST00000485699 580 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA10P31260 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA10P31260 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.19■□□□□ 0.82
HOXA10P31260 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.19■□□□□ 0.82
HOXA10P31260 AC092337.1-201ENST00000568699 1129 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 CTBP2P3-201ENST00000585629 1255 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 AL391256.1-201ENST00000443260 1855 ntBASIC20.19■□□□□ 0.82
HOXA10P31260 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HOXA10P31260 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
HOXA10P31260 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
HOXA10P31260 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXA10P31260 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
HOXA10P31260 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA10P31260 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXA10P31260 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA10P31260 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXA10P31260 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXA10P31260 RAB43P1-201ENST00000561790 589 ntBASIC20.18■□□□□ 0.82
HOXA10P31260 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA10P31260 MIR6069-201ENST00000620069 79 ntBASIC20.18■□□□□ 0.82
HOXA10P31260 AL109936.8-201ENST00000641772 604 ntBASIC20.18■□□□□ 0.82
HOXA10P31260 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HOXA10P31260 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
HOXA10P31260 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HOXA10P31260 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA10P31260 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HOXA10P31260 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXA10P31260 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXA10P31260 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXA10P31260 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXA10P31260 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HOXA10P31260 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 GPAA1P2-202ENST00000606848 1787 ntBASIC20.17■□□□□ 0.82
HOXA10P31260 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HOXA10P31260 AC098850.1-201ENST00000419919 790 ntBASIC20.17■□□□□ 0.82
HOXA10P31260 AC022210.1-201ENST00000449856 793 ntBASIC20.17■□□□□ 0.82
HOXA10P31260 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXA10P31260 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.17■□□□□ 0.82
HOXA10P31260 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.17■□□□□ 0.82
HOXA10P31260 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC20.17■□□□□ 0.82
HOXA10P31260 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.17■□□□□ 0.82
HOXA10P31260 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
HOXA10P31260 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HOXA10P31260 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXA10P31260 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXA10P31260 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC20.17■□□□□ 0.82
HOXA10P31260 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXA10P31260 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
HOXA10P31260 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.16■□□□□ 0.82
HOXA10P31260 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXA10P31260 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
HOXA10P31260 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
HOXA10P31260 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA10P31260 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA10P31260 AP002490.2-201ENST00000524791 560 ntBASIC20.16■□□□□ 0.82
HOXA10P31260 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXA10P31260 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA10P31260 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.16■□□□□ 0.82
HOXA10P31260 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXA10P31260 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HOXA10P31260 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXA10P31260 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms