Protein–RNA interactions for Protein: P27695

APEX1, DNA-(apurinic or apyrimidinic site) lyase, humanhuman

Known RBP Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1P27695 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.2■□□□□ 0.02
APEX1P27695 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AP000867.4-201ENST00000641616 219 ntBASIC15.2■□□□□ 0.02
APEX1P27695 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.2■□□□□ 0.02
APEX1P27695 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APEX1P27695 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
APEX1P27695 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.19■□□□□ 0.02
APEX1P27695 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 AC003669.1-201ENST00000334569 611 ntBASIC15.19■□□□□ 0.02
APEX1P27695 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 AC079781.3-201ENST00000449110 356 ntBASIC15.19■□□□□ 0.02
APEX1P27695 AC009078.2-202ENST00000463353 338 ntBASIC15.19■□□□□ 0.02
APEX1P27695 AL160237.2-201ENST00000556165 472 ntBASIC15.19■□□□□ 0.02
APEX1P27695 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.19■□□□□ 0.02
APEX1P27695 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.19■□□□□ 0.02
APEX1P27695 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.19■□□□□ 0.02
APEX1P27695 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.19■□□□□ 0.02
APEX1P27695 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
APEX1P27695 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.19■□□□□ 0.02
APEX1P27695 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 AP005117.1-201ENST00000584346 1413 ntBASIC15.18■□□□□ 0.02
APEX1P27695 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.18■□□□□ 0.02
APEX1P27695 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
APEX1P27695 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 AC124947.2-201ENST00000547118 1133 ntBASIC15.18■□□□□ 0.02
APEX1P27695 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.18■□□□□ 0.02
APEX1P27695 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
APEX1P27695 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
APEX1P27695 AC009336.1-201ENST00000608941 1553 ntBASIC15.18■□□□□ 0.02
APEX1P27695 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.18■□□□□ 0.02
APEX1P27695 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 AL365203.3-201ENST00000609742 2057 ntBASIC15.18■□□□□ 0.02
APEX1P27695 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
APEX1P27695 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.18■□□□□ 0.02
APEX1P27695 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
APEX1P27695 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
APEX1P27695 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APEX1P27695 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.17■□□□□ 0.02
APEX1P27695 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
APEX1P27695 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
APEX1P27695 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms