Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 AC022188.1-201ENST00000620960 1664 ntBASIC15.72■□□□□ 0.11
CHMP24386 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.72■□□□□ 0.11
CHMP24386 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.72■□□□□ 0.11
CHMP24386 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 AL513523.2-202ENST00000427283 2040 ntBASIC15.72■□□□□ 0.11
CHMP24386 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CHMP24386 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CHMP24386 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP24386 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.71■□□□□ 0.11
CHMP24386 AC105339.3-201ENST00000560043 636 ntBASIC15.71■□□□□ 0.11
CHMP24386 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.71■□□□□ 0.11
CHMP24386 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.71■□□□□ 0.11
CHMP24386 AC120114.3-201ENST00000611923 658 ntBASIC15.71■□□□□ 0.11
CHMP24386 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.71■□□□□ 0.11
CHMP24386 MIR7706-201ENST00000613747 67 ntBASIC15.71■□□□□ 0.11
CHMP24386 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.71■□□□□ 0.11
CHMP24386 PKD1P5-201ENST00000532415 10291 ntBASIC15.71■□□□□ 0.11
CHMP24386 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP24386 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.71■□□□□ 0.11
CHMP24386 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CHMP24386 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.1
CHMP24386 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CHMP24386 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CHMP24386 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHMP24386 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.7■□□□□ 0.1
CHMP24386 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.7■□□□□ 0.1
CHMP24386 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.7■□□□□ 0.1
CHMP24386 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CHMP24386 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms