Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 SAPCD2P2-201ENST00000431719 1174 ntBASIC14.19□□□□□ -0.14
VAMP1P23763 PON3-205ENST00000451904 1053 ntTSL 3 BASIC14.19□□□□□ -0.14
VAMP1P23763 AC128688.1-201ENST00000487626 519 ntBASIC14.19□□□□□ -0.14
VAMP1P23763 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.19□□□□□ -0.14
VAMP1P23763 FITM1-202ENST00000559294 800 ntBASIC14.19□□□□□ -0.14
VAMP1P23763 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.19□□□□□ -0.14
VAMP1P23763 RN7SL121P-201ENST00000584223 273 ntBASIC14.19□□□□□ -0.14
VAMP1P23763 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.19□□□□□ -0.14
VAMP1P23763 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 AC019129.2-201ENST00000609837 1235 ntBASIC14.19□□□□□ -0.14
VAMP1P23763 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VAMP1P23763 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
VAMP1P23763 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VAMP1P23763 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.18□□□□□ -0.14
VAMP1P23763 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.18□□□□□ -0.14
VAMP1P23763 AC233702.5-201ENST00000584107 538 ntBASIC14.18□□□□□ -0.14
VAMP1P23763 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
VAMP1P23763 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VAMP1P23763 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VAMP1P23763 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VAMP1P23763 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
VAMP1P23763 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.17□□□□□ -0.14
VAMP1P23763 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
VAMP1P23763 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms