Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.132e-6■■□□□ 14
RPS3P23396 BCAM-208ENST00000590196 518 ntTSL 514.87□□□□□ -0.031e-15■■□□□ 14
RPS3P23396 CD81-214ENST00000530239 425 ntTSL 223.91■■□□□ 1.426e-7■■□□□ 14
RPS3P23396 CD81-211ENST00000524805 982 ntTSL 518.09■□□□□ 0.496e-7■■□□□ 14
RPS3P23396 CD81-208ENST00000492252 1136 ntTSL 317.06■□□□□ 0.326e-7■■□□□ 14
RPS3P23396 CD81-205ENST00000475945 606 ntTSL 216.64■□□□□ 0.256e-7■■□□□ 14
RPS3P23396 CD81-217ENST00000533417 444 ntTSL 316.2■□□□□ 0.186e-7■■□□□ 14
RPS3P23396 CD81-215ENST00000530648 558 ntTSL 413.82□□□□□ -0.26e-7■■□□□ 14
RPS3P23396 TGFBI-214ENST00000515433 4661 ntTSL 29.38□□□□□ -0.912e-7■■□□□ 14
RPS3P23396 HM13-215ENST00000474466 440 ntTSL 310.09□□□□□ -0.791e-10■■□□□ 14
RPS3P23396 ANXA5-211ENST00000515717 594 ntTSL 27.91□□□□□ -1.141e-6■■□□□ 14
RPS3P23396 RPL34-201ENST00000394665 529 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.199e-19■■□□□ 14
RPS3P23396 RPL34-202ENST00000394667 441 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.199e-19■■□□□ 14
RPS3P23396 RPL34-204ENST00000502534 560 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.239e-19■■□□□ 14
RPS3P23396 MOB1A-202ENST00000463975 1799 ntTSL 216.41■□□□□ 0.223e-11■■□□□ 14
RPS3P23396 MOB1A-206ENST00000497054 784 ntTSL 212.91□□□□□ -0.343e-11■■□□□ 14
RPS3P23396 MOB1A-201ENST00000396049 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.633e-11■■□□□ 14
RPS3P23396 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.872e-7■■□□□ 14
RPS3P23396 LRP5-206ENST00000529993 5103 ntTSL 1 (best)14.35□□□□□ -0.112e-7■■□□□ 14
RPS3P23396 RACK1-205ENST00000502905 643 ntTSL 39.84□□□□□ -0.832e-11■■□□□ 14
RPS3P23396 RACK1-217ENST00000507756 889 ntTSL 58.57□□□□□ -1.042e-11■■□□□ 14
RPS3P23396 RACK1-209ENST00000504128 990 ntTSL 28.11□□□□□ -1.112e-11■■□□□ 14
RPS3P23396 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.292e-27■■□□□ 13.9
RPS3P23396 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.292e-27■■□□□ 13.9
RPS3P23396 RPL19-206ENST00000580333 577 ntTSL 210.33□□□□□ -0.768e-27■■□□□ 13.9
RPS3P23396 RPL19-201ENST00000225430 732 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.768e-27■■□□□ 13.9
RPS3P23396 RPL19-205ENST00000579374 690 ntAPPRIS ALT1 TSL 2 BASIC10.3□□□□□ -0.768e-27■■□□□ 13.9
RPS3P23396 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.383e-18■■□□□ 13.9
RPS3P23396 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.33■□□□□ 0.523e-7■■□□□ 13.9
RPS3P23396 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.13■□□□□ 0.173e-18■■□□□ 13.9
RPS3P23396 AGRN-204ENST00000466223 459 ntTSL 215.63■□□□□ 0.091e-9■■□□□ 13.9
RPS3P23396 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.123e-7■■□□□ 13.9
RPS3P23396 RPS3-211ENST00000528847 639 ntTSL 59.39□□□□□ -0.912e-25■■□□□ 13.9
RPS3P23396 NDUFC1-208ENST00000513022 564 ntTSL 412.93□□□□□ -0.344e-10■■□□□ 13.9
RPS3P23396 RPS3-213ENST00000529285 550 ntTSL 520.17■□□□□ 0.822e-25■■□□□ 13.9
RPS3P23396 RPS3-212ENST00000529173 1373 ntTSL 513.22□□□□□ -0.291e-14■■□□□ 13.9
RPS3P23396 RPS3-203ENST00000524851 866 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.91e-14■■□□□ 13.9
RPS3P23396 RPS3-215ENST00000530170 531 ntTSL 59.12□□□□□ -0.951e-20■■□□□ 13.9
RPS3P23396 RPS3-207ENST00000526608 710 ntTSL 5 BASIC8.53□□□□□ -1.041e-14■■□□□ 13.9
RPS3P23396 RBM3-204ENST00000466764 1375 ntTSL 316.45■□□□□ 0.222e-7■■□□□ 13.9
RPS3P23396 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.12e-7■■□□□ 13.9
RPS3P23396 RBM3-205ENST00000472897 501 ntTSL 515.43■□□□□ 0.062e-7■■□□□ 13.9
RPS3P23396 RBM3-208ENST00000489344 724 ntTSL 213.08□□□□□ -0.322e-7■■□□□ 13.9
RPS3P23396 RBM3-203ENST00000376759 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.522e-7■■□□□ 13.9
RPS3P23396 RBM3-209ENST00000490127 567 ntTSL 510.94□□□□□ -0.662e-7■■□□□ 13.9
RPS3P23396 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.41e-7■■□□□ 13.9
RPS3P23396 FBLN1-211ENST00000451475 544 ntTSL 515.01□□□□□ -0.015e-9■■□□□ 13.9
RPS3P23396 MVD-202ENST00000561895 499 ntTSL 212.7□□□□□ -0.386e-14■■□□□ 13.9
RPS3P23396 NSFL1C-203ENST00000381653 1446 ntTSL 521.37■■□□□ 1.012e-6■■□□□ 13.9
RPS3P23396 EIF4G1-224ENST00000444861 2384 ntTSL 1 (best)21.25■□□□□ 0.991e-11■■□□□ 13.9
RPS3P23396 NSFL1C-205ENST00000470376 845 ntTSL 320.98■□□□□ 0.952e-6■■□□□ 13.9
RPS3P23396 PLCXD1-208ENST00000445062 555 ntTSL 420.47■□□□□ 0.872e-6■■□□□ 13.9
RPS3P23396 VARS-218ENST00000459667 793 ntTSL 320.2■□□□□ 0.825e-7■■□□□ 13.9
RPS3P23396 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.792e-6■■□□□ 13.9
RPS3P23396 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.97■□□□□ 0.792e-6■■□□□ 13.9
RPS3P23396 DHRS2-205ENST00000553896 1352 ntTSL 1 (best)19.88■□□□□ 0.777e-34■■□□□ 13.9
RPS3P23396 DHRS2-203ENST00000432832 834 ntTSL 219.86■□□□□ 0.777e-34■■□□□ 13.9
RPS3P23396 SNAPC3-204ENST00000461041 403 ntTSL 219.59■□□□□ 0.732e-6■■□□□ 13.9
RPS3P23396 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.47■□□□□ 0.712e-6■■□□□ 13.9
RPS3P23396 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.39■□□□□ 0.692e-6■■□□□ 13.9
RPS3P23396 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.5■□□□□ 0.552e-6■■□□□ 13.9
RPS3P23396 CBFA2T3-205ENST00000563856 2380 ntTSL 217.98■□□□□ 0.472e-6■■□□□ 13.9
RPS3P23396 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.422e-6■■□□□ 13.9
RPS3P23396 NSFL1C-213ENST00000555944 2588 ntTSL 217.37■□□□□ 0.372e-6■■□□□ 13.9
RPS3P23396 CBFA2T3-206ENST00000563920 1815 ntTSL 217.32■□□□□ 0.362e-6■■□□□ 13.9
RPS3P23396 INTS11-207ENST00000434694 1056 ntTSL 517.22■□□□□ 0.352e-6■■□□□ 13.9
RPS3P23396 NSFL1C-212ENST00000555568 863 ntTSL 317.21■□□□□ 0.352e-6■■□□□ 13.9
RPS3P23396 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.7■□□□□ 0.262e-6■■□□□ 13.9
RPS3P23396 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.69■□□□□ 0.262e-6■■□□□ 13.9
RPS3P23396 INTS11-242ENST00000531377 816 ntTSL 516.68■□□□□ 0.262e-6■■□□□ 13.9
RPS3P23396 INTS11-243ENST00000532772 1618 ntTSL 516.64■□□□□ 0.252e-6■■□□□ 13.9
RPS3P23396 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.222e-6■■□□□ 13.9
RPS3P23396 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.17■□□□□ 0.182e-6■■□□□ 13.9
RPS3P23396 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.11■□□□□ 0.172e-6■■□□□ 13.9
RPS3P23396 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.161e-6■■□□□ 13.9
RPS3P23396 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.152e-6■■□□□ 13.9
RPS3P23396 INTS11-201ENST00000323275 2450 ntTSL 1 (best)15.59■□□□□ 0.092e-6■■□□□ 13.9
RPS3P23396 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.062e-6■■□□□ 13.9
RPS3P23396 GNB1-206ENST00000471354 1512 ntTSL 515.41■□□□□ 0.063e-11■■□□□ 13.9
RPS3P23396 INTS11-210ENST00000458452 2571 ntTSL 215.16■□□□□ 0.022e-6■■□□□ 13.9
RPS3P23396 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 02e-6■■□□□ 13.9
RPS3P23396 INTS11-240ENST00000531020 548 ntTSL 415.02■□□□□ -02e-6■■□□□ 13.9
RPS3P23396 SLC7A5-202ENST00000563489 780 ntTSL 214.93□□□□□ -0.022e-6■■□□□ 13.9
RPS3P23396 INTS11-233ENST00000527098 2004 ntTSL 214.9□□□□□ -0.022e-6■■□□□ 13.9
RPS3P23396 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.85□□□□□ -0.032e-6■■□□□ 13.9
RPS3P23396 PLCXD1-211ENST00000484611 540 ntTSL 414.85□□□□□ -0.032e-6■■□□□ 13.9
RPS3P23396 PSMD1-204ENST00000431051 2506 ntTSL 1 (best)14.79□□□□□ -0.042e-6■■□□□ 13.9
RPS3P23396 INTS11-236ENST00000528879 1524 ntTSL 514.68□□□□□ -0.062e-6■■□□□ 13.9
RPS3P23396 PLCXD1-206ENST00000430923 587 ntAPPRIS ALT2 TSL 214.63□□□□□ -0.072e-6■■□□□ 13.9
RPS3P23396 INTS11-216ENST00000478641 3079 ntTSL 214.59□□□□□ -0.072e-6■■□□□ 13.9
RPS3P23396 INTS11-234ENST00000527383 668 ntTSL 314.53□□□□□ -0.082e-6■■□□□ 13.9
RPS3P23396 PLCXD1-205ENST00000429181 469 ntTSL 414.46□□□□□ -0.092e-6■■□□□ 13.9
RPS3P23396 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.44□□□□□ -0.12e-6■■□□□ 13.9
RPS3P23396 GNB1-205ENST00000461893 2438 ntTSL 214.29□□□□□ -0.123e-11■■□□□ 13.9
RPS3P23396 INTS11-214ENST00000470030 2369 ntTSL 514.19□□□□□ -0.142e-6■■□□□ 13.9
RPS3P23396 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.142e-6■■□□□ 13.9
RPS3P23396 PLCXD1-209ENST00000447472 587 ntAPPRIS ALT2 TSL 413.85□□□□□ -0.192e-6■■□□□ 13.9
RPS3P23396 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.222e-6■■□□□ 13.9
RPS3P23396 PLCXD1-207ENST00000443019 284 ntTSL 513.57□□□□□ -0.242e-6■■□□□ 13.9
RPS3P23396 PLCXD1-210ENST00000448477 828 ntTSL 213.55□□□□□ -0.242e-6■■□□□ 13.9
Retrieved 100 of 24,271 protein–RNA pairs in 129.4 ms