Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 RARRES2P10-201ENST00000564312 460 ntBASIC12.9□□□□□ -0.34
RAB4AP20338 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.9□□□□□ -0.34
RAB4AP20338 GAMT-205ENST00000640762 751 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
RAB4AP20338 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RAB4AP20338 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
RAB4AP20338 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB4AP20338 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB4AP20338 GAS7-202ENST00000396115 929 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB4AP20338 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 AC009949.1-201ENST00000623048 1830 ntBASIC12.89□□□□□ -0.35
RAB4AP20338 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 AC005915.1-201ENST00000624912 2018 ntBASIC12.89□□□□□ -0.35
RAB4AP20338 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB4AP20338 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
RAB4AP20338 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB4AP20338 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
RAB4AP20338 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB4AP20338 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC12.88□□□□□ -0.35
RAB4AP20338 MIR3180-4-201ENST00000582223 153 ntBASIC12.88□□□□□ -0.35
RAB4AP20338 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 AC096733.2-201ENST00000609937 1394 ntBASIC12.88□□□□□ -0.35
RAB4AP20338 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms