Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.74□□□□□ -0.05
RAB3BP20337 TMA16-209ENST00000513272 803 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB3BP20337 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.74□□□□□ -0.05
RAB3BP20337 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
RAB3BP20337 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
RAB3BP20337 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.74□□□□□ -0.05
RAB3BP20337 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.73□□□□□ -0.05
RAB3BP20337 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.73□□□□□ -0.05
RAB3BP20337 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 DUX4L17-201ENST00000557360 1267 ntBASIC14.73□□□□□ -0.05
RAB3BP20337 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 AL138831.2-201ENST00000606564 490 ntBASIC14.73□□□□□ -0.05
RAB3BP20337 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 Z83836.1-201ENST00000624605 1642 ntBASIC14.73□□□□□ -0.05
RAB3BP20337 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.73□□□□□ -0.05
RAB3BP20337 AC126755.1-201ENST00000525846 6405 ntBASIC14.73□□□□□ -0.05
RAB3BP20337 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
RAB3BP20337 AC002310.6-201ENST00000624451 1377 ntBASIC14.73□□□□□ -0.05
RAB3BP20337 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
RAB3BP20337 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RAB3BP20337 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB3BP20337 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.72□□□□□ -0.05
RAB3BP20337 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 TSPY15P-201ENST00000457163 923 ntBASIC14.72□□□□□ -0.05
RAB3BP20337 COX11P1-201ENST00000489116 835 ntBASIC14.72□□□□□ -0.05
RAB3BP20337 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.72□□□□□ -0.05
RAB3BP20337 GUSBP12-201ENST00000513727 720 ntBASIC14.72□□□□□ -0.05
RAB3BP20337 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.72□□□□□ -0.05
RAB3BP20337 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RAB3BP20337 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
RAB3BP20337 AL139011.1-202ENST00000642063 584 ntBASIC14.72□□□□□ -0.05
RAB3BP20337 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
RAB3BP20337 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RAB3BP20337 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms