Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
H2AFXP16104 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
H2AFXP16104 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.4■□□□□ 0.38
H2AFXP16104 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
H2AFXP16104 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
H2AFXP16104 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
H2AFXP16104 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 AC007967.3-201ENST00000434308 558 ntBASIC17.4■□□□□ 0.38
H2AFXP16104 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.4■□□□□ 0.38
H2AFXP16104 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.4■□□□□ 0.38
H2AFXP16104 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.4■□□□□ 0.38
H2AFXP16104 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
H2AFXP16104 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.4■□□□□ 0.38
H2AFXP16104 C8orf49-201ENST00000525043 1968 ntBASIC17.4■□□□□ 0.38
H2AFXP16104 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.4■□□□□ 0.38
H2AFXP16104 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 AL137784.3-201ENST00000623858 2288 ntBASIC17.4■□□□□ 0.38
H2AFXP16104 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
H2AFXP16104 AL031731.1-201ENST00000642131 2094 ntBASIC17.4■□□□□ 0.38
H2AFXP16104 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.39■□□□□ 0.38
H2AFXP16104 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.39■□□□□ 0.38
H2AFXP16104 AL391807.1-203ENST00000604392 2365 ntBASIC17.39■□□□□ 0.38
H2AFXP16104 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
H2AFXP16104 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 CCR12P-201ENST00000446203 998 ntBASIC17.39■□□□□ 0.37
H2AFXP16104 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
H2AFXP16104 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.39■□□□□ 0.37
H2AFXP16104 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.39■□□□□ 0.37
H2AFXP16104 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.39■□□□□ 0.37
H2AFXP16104 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
H2AFXP16104 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
H2AFXP16104 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.39■□□□□ 0.37
H2AFXP16104 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.39■□□□□ 0.37
H2AFXP16104 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.39■□□□□ 0.37
H2AFXP16104 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 ESRRAP1-201ENST00000400596 1257 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.38■□□□□ 0.37
H2AFXP16104 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.38■□□□□ 0.37
H2AFXP16104 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.38■□□□□ 0.37
H2AFXP16104 AC111152.3-201ENST00000569699 673 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
H2AFXP16104 REXO1L10P-201ENST00000615707 1290 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 REXO1L12P-201ENST00000622156 912 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
H2AFXP16104 AC041040.2-201ENST00000622926 2899 ntBASIC17.38■□□□□ 0.37
H2AFXP16104 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
H2AFXP16104 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms