Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.86■□□□□ 0.13
MT-ND1P03886 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.86■□□□□ 0.13
MT-ND1P03886 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
MT-ND1P03886 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.85■□□□□ 0.13
MT-ND1P03886 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.85■□□□□ 0.13
MT-ND1P03886 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.85■□□□□ 0.13
MT-ND1P03886 AC246785.2-201ENST00000432512 513 ntBASIC15.85■□□□□ 0.13
MT-ND1P03886 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
MT-ND1P03886 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.85■□□□□ 0.13
MT-ND1P03886 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
MT-ND1P03886 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 AC132938.5-201ENST00000624980 1813 ntBASIC15.84■□□□□ 0.13
MT-ND1P03886 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
MT-ND1P03886 FAM220CP-201ENST00000395253 831 ntBASIC15.84■□□□□ 0.13
MT-ND1P03886 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 AL121956.5-201ENST00000625261 221 ntBASIC15.84■□□□□ 0.13
MT-ND1P03886 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.84■□□□□ 0.13
MT-ND1P03886 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
MT-ND1P03886 AL353593.2-201ENST00000602529 1483 ntBASIC15.84■□□□□ 0.13
MT-ND1P03886 AL596087.1-201ENST00000400979 1969 ntBASIC15.84■□□□□ 0.13
MT-ND1P03886 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
MT-ND1P03886 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms