Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC19.34■□□□□ 0.69
CTDNEP1O95476 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 AC079776.4-201ENST00000511039 504 ntBASIC19.34■□□□□ 0.69
CTDNEP1O95476 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CTDNEP1O95476 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CTDNEP1O95476 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CTDNEP1O95476 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.33■□□□□ 0.69
CTDNEP1O95476 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 IL9RP2-201ENST00000423948 1312 ntBASIC19.33■□□□□ 0.69
CTDNEP1O95476 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC19.33■□□□□ 0.69
CTDNEP1O95476 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CTDNEP1O95476 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.33■□□□□ 0.69
CTDNEP1O95476 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.33■□□□□ 0.68
CTDNEP1O95476 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 SLC25A1P1-201ENST00000528351 927 ntBASIC19.33■□□□□ 0.68
CTDNEP1O95476 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 AL513523.2-202ENST00000427283 2040 ntBASIC19.33■□□□□ 0.68
CTDNEP1O95476 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.33■□□□□ 0.68
CTDNEP1O95476 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CTDNEP1O95476 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 LBH-204ENST00000406087 559 ntTSL 4 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 RPL13AP23-201ENST00000480739 586 ntBASIC19.32■□□□□ 0.68
CTDNEP1O95476 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDNEP1O95476 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 AL596087.1-201ENST00000400979 1969 ntBASIC19.32■□□□□ 0.68
CTDNEP1O95476 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CTDNEP1O95476 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.31■□□□□ 0.68
CTDNEP1O95476 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.31■□□□□ 0.68
CTDNEP1O95476 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDNEP1O95476 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms