Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 AC091167.2-201ENST00000579581 588 ntBASIC15.11■□□□□ 0.01
PTP4A3O75365 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
PTP4A3O75365 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.11■□□□□ 0.01
PTP4A3O75365 AC025062.2-201ENST00000605477 670 ntBASIC15.11■□□□□ 0.01
PTP4A3O75365 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTP4A3O75365 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.11■□□□□ 0.01
PTP4A3O75365 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.11■□□□□ 0.01
PTP4A3O75365 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 AC008741.2-201ENST00000612792 3115 ntBASIC15.11■□□□□ 0.01
PTP4A3O75365 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PTP4A3O75365 AL596087.1-201ENST00000400979 1969 ntBASIC15.11■□□□□ 0.01
PTP4A3O75365 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PTP4A3O75365 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.11■□□□□ 0.01
PTP4A3O75365 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 SLC22A20-204ENST00000530038 1673 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.1■□□□□ 0.01
PTP4A3O75365 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.1■□□□□ 0.01
PTP4A3O75365 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 PMS2P1-201ENST00000431037 1228 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.1■□□□□ 0.01
PTP4A3O75365 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.1■□□□□ 0.01
PTP4A3O75365 SCARNA2-201ENST00000458748 420 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 AC021087.4-201ENST00000563761 564 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
PTP4A3O75365 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.1■□□□□ 0.01
PTP4A3O75365 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
PTP4A3O75365 AL805961.1-202ENST00000641562 540 ntBASIC15.1■□□□□ 0.01
PTP4A3O75365 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.1■□□□□ 0.01
PTP4A3O75365 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
PTP4A3O75365 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PTP4A3O75365 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.09■□□□□ 0.01
PTP4A3O75365 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PTP4A3O75365 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PTP4A3O75365 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms