Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 AC092171.3-201ENST00000610122 2651 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 AD000864.1-201ENST00000624076 2295 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 AP000344.2-201ENST00000512987 629 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 FAM86C2P-203ENST00000528684 1004 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
CLDN5O00501 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CLDN5O00501 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 WASH6P-202ENST00000359512 1437 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.62■□□□□ 0.41
CLDN5O00501 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 AC011676.5-201ENST00000624864 2660 ntBASIC17.62■□□□□ 0.41
CLDN5O00501 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN5O00501 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN5O00501 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN5O00501 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 AC093520.2-201ENST00000561830 333 ntBASIC17.61■□□□□ 0.41
CLDN5O00501 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN5O00501 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN5O00501 AC021097.1-201ENST00000607902 574 ntBASIC17.61■□□□□ 0.41
CLDN5O00501 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 AKAP8P1-201ENST00000434743 1349 ntBASIC17.61■□□□□ 0.41
CLDN5O00501 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN5O00501 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN5O00501 FLJ38576-201ENST00000623820 2459 ntBASIC17.61■□□□□ 0.41
CLDN5O00501 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CLDN5O00501 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CLDN5O00501 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN5O00501 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN5O00501 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN5O00501 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN5O00501 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN5O00501 SPCS2P4-201ENST00000436160 681 ntBASIC17.6■□□□□ 0.41
CLDN5O00501 AL592309.1-201ENST00000443127 649 ntBASIC17.6■□□□□ 0.41
CLDN5O00501 AL138918.1-201ENST00000568306 659 ntBASIC17.6■□□□□ 0.41
CLDN5O00501 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 AC004835.2-201ENST00000603762 682 ntBASIC17.6■□□□□ 0.41
CLDN5O00501 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN5O00501 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN5O00501 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN5O00501 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms