Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 AL390754.1-201ENST00000619088 582 ntBASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 AC073592.8-201ENST00000624126 511 ntBASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.32■□□□□ 0.2
HS3ST3A1Q9Y663 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AC027369.6-201ENST00000525520 931 ntBASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 AL645728.1-201ENST00000366221 2101 ntBASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HS3ST3A1Q9Y663 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 AL353705.2-201ENST00000428243 662 ntBASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 FAM207CP-201ENST00000443486 507 ntBASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 AL590560.3-201ENST00000623350 461 ntBASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 AL512652.2-201ENST00000625156 1716 ntBASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.3■□□□□ 0.2
HS3ST3A1Q9Y663 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 HLA-V-204ENST00000476601 1289 ntBASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HS3ST3A1Q9Y663 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms