Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 MIR4469-201ENST00000583919 79 ntBASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 AL391256.1-201ENST00000443260 1855 ntBASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.73■□□□□ 0.59
COL4A3BPQ9Y5P4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AC091167.2-201ENST00000579581 588 ntBASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 MPDU1-223ENST00000582151 728 ntBASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AC013467.2-201ENST00000605472 835 ntBASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL4A3BPQ9Y5P4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 RPS8P6-201ENST00000426177 609 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 FAM58CP-201ENST00000435741 640 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AC005412.3-201ENST00000580309 715 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AC091812.2-201ENST00000619081 385 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AL645728.2-201ENST00000641974 660 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AL353732.1-201ENST00000569618 1459 ntBASIC18.71■□□□□ 0.59
COL4A3BPQ9Y5P4 AC092919.2-201ENST00000623631 1645 ntBASIC18.71■□□□□ 0.58
COL4A3BPQ9Y5P4 AC006277.1-201ENST00000624348 1610 ntBASIC18.71■□□□□ 0.58
COL4A3BPQ9Y5P4 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
COL4A3BPQ9Y5P4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms