Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 TUBB3P1-201ENST00000405796 1332 ntBASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 SPDYE7P-202ENST00000420373 878 ntBASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 AC069262.1-201ENST00000539058 672 ntBASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CTDP1Q9Y5B0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 KRT18P34-201ENST00000488218 1270 ntBASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 AC093214.1-201ENST00000511688 1107 ntBASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 SPCS2P1-201ENST00000561636 679 ntBASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CTDP1Q9Y5B0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 AC125807.1-201ENST00000483097 614 ntBASIC19.3■□□□□ 0.68
CTDP1Q9Y5B0 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms