Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
R3HCC1Q9Y3T6 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
R3HCC1Q9Y3T6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.27■□□□□ 0.67
R3HCC1Q9Y3T6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 NSUN5P1-202ENST00000421140 1535 ntBASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 NSUN5P2-203ENST00000457352 1529 ntBASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 AC009533.2-201ENST00000543664 586 ntBASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
R3HCC1Q9Y3T6 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.25■□□□□ 0.67
R3HCC1Q9Y3T6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms