Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NCKIPSDQ9NZQ3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PMS2P2-201ENST00000425039 1128 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AP006288.1-201ENST00000446065 395 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 STK19B-204ENST00000512515 211 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 STK25P1-201ENST00000585406 838 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AC092068.3-201ENST00000587894 2016 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AL603756.1-201ENST00000606511 2163 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 GGTLC5P-201ENST00000617623 998 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 AL805961.1-202ENST00000641562 540 ntBASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NCKIPSDQ9NZQ3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 AC006504.4-201ENST00000592118 1568 ntBASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 RPS8P6-201ENST00000426177 609 ntBASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 AC108073.2-201ENST00000464002 357 ntBASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 GPR89P-201ENST00000407924 1495 ntBASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.99■□□□□ 0.31
NCKIPSDQ9NZQ3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 RNF216P1-203ENST00000404404 2427 ntBASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
NCKIPSDQ9NZQ3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms