Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 AC093909.1-201ENST00000504731 1122 ntBASIC13.89□□□□□ -0.19
CALYQ9NYX4 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 MIR4492-201ENST00000581627 80 ntBASIC13.89□□□□□ -0.19
CALYQ9NYX4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 AC079328.2-201ENST00000561241 3354 ntBASIC13.89□□□□□ -0.19
CALYQ9NYX4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CALYQ9NYX4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CALYQ9NYX4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.88□□□□□ -0.19
CALYQ9NYX4 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PMS2P1-201ENST00000431037 1228 ntBASIC13.88□□□□□ -0.19
CALYQ9NYX4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AL049840.3-201ENST00000602669 611 ntBASIC13.88□□□□□ -0.19
CALYQ9NYX4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 AP001350.2-201ENST00000625104 1094 ntBASIC13.88□□□□□ -0.19
CALYQ9NYX4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CALYQ9NYX4 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
CALYQ9NYX4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 MRPL3P1-201ENST00000400109 1033 ntBASIC13.87□□□□□ -0.19
CALYQ9NYX4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
CALYQ9NYX4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 AL662844.1-201ENST00000546340 181 ntBASIC13.87□□□□□ -0.19
CALYQ9NYX4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.87□□□□□ -0.19
CALYQ9NYX4 AP001005.1-201ENST00000571755 1248 ntBASIC13.87□□□□□ -0.19
CALYQ9NYX4 MIR4751-201ENST00000578027 74 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms