Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.66■□□□□ 0.1
RLIMQ9NVW2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 REXO1L6P-202ENST00000619970 1078 ntBASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.66■□□□□ 0.1
RLIMQ9NVW2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 AC024909.3-201ENST00000611513 2257 ntBASIC15.65■□□□□ 0.1
RLIMQ9NVW2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 MTDHP4-201ENST00000600287 670 ntBASIC15.65■□□□□ 0.1
RLIMQ9NVW2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.65■□□□□ 0.1
RLIMQ9NVW2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
RLIMQ9NVW2 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RLIMQ9NVW2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 AKR1C7P-201ENST00000305623 895 ntBASIC15.64■□□□□ 0.09
RLIMQ9NVW2 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RLIMQ9NVW2 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms