Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VPS11Q9H270 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VPS11Q9H270 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.92■□□□□ 0.3
VPS11Q9H270 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
VPS11Q9H270 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.92■□□□□ 0.3
VPS11Q9H270 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VPS11Q9H270 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 PKD1P5-201ENST00000532415 10291 ntBASIC16.91■□□□□ 0.3
VPS11Q9H270 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VPS11Q9H270 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 AP002383.4-201ENST00000442518 975 ntBASIC16.91■□□□□ 0.3
VPS11Q9H270 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.91■□□□□ 0.3
VPS11Q9H270 KRT18P21-201ENST00000515767 1272 ntBASIC16.91■□□□□ 0.3
VPS11Q9H270 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
VPS11Q9H270 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
VPS11Q9H270 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS11Q9H270 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.91■□□□□ 0.3
VPS11Q9H270 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
VPS11Q9H270 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.91■□□□□ 0.3
VPS11Q9H270 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.91■□□□□ 0.3
VPS11Q9H270 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VPS11Q9H270 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VPS11Q9H270 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VPS11Q9H270 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
VPS11Q9H270 SPDYE21P-201ENST00000413323 827 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 AC074051.2-201ENST00000565115 352 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 AL049597.2-201ENST00000565575 961 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 AC116407.4-201ENST00000623319 1061 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 AP000867.4-201ENST00000641616 219 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
VPS11Q9H270 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.9■□□□□ 0.3
VPS11Q9H270 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.9■□□□□ 0.3
VPS11Q9H270 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VPS11Q9H270 AC004817.3-201ENST00000602957 2129 ntBASIC16.9■□□□□ 0.3
VPS11Q9H270 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.3
VPS11Q9H270 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VPS11Q9H270 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VPS11Q9H270 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VPS11Q9H270 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
VPS11Q9H270 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms