Protein–RNA interactions for Protein: Q9C099

LRRCC1, Leucine-rich repeat and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRCC1Q9C099 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 RNU1-129P-201ENST00000384064 167 ntBASIC20.63■□□□□ 0.89
LRRCC1Q9C099 AL022342.1-201ENST00000400363 863 ntBASIC20.63■□□□□ 0.89
LRRCC1Q9C099 KRT18P3-201ENST00000451602 1288 ntBASIC20.63■□□□□ 0.89
LRRCC1Q9C099 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 U1.21-201ENST00000580816 167 ntBASIC20.63■□□□□ 0.89
LRRCC1Q9C099 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LRRCC1Q9C099 ALOX12P2-203ENST00000570921 1945 ntBASIC20.63■□□□□ 0.89
LRRCC1Q9C099 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 GGT3P-204ENST00000453783 1664 ntBASIC20.62■□□□□ 0.89
LRRCC1Q9C099 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AC124067.4-201ENST00000519691 2379 ntBASIC20.62■□□□□ 0.89
LRRCC1Q9C099 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 RNA5SP416-201ENST00000516838 111 ntBASIC20.62■□□□□ 0.89
LRRCC1Q9C099 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 KRT19P2-202ENST00000557173 1012 ntBASIC20.62■□□□□ 0.89
LRRCC1Q9C099 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
LRRCC1Q9C099 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 FALEC-201ENST00000416894 566 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
LRRCC1Q9C099 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms