Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 AC006538.1-201ENST00000567905 1585 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 AP000347.1-202ENST00000435868 847 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 AC006557.2-201ENST00000592985 1240 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRIM2Q9C040 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
TRIM2Q9C040 AC092171.3-201ENST00000610122 2651 ntBASIC15.46■□□□□ 0.07
TRIM2Q9C040 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.06
TRIM2Q9C040 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM2Q9C040 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.46■□□□□ 0.06
TRIM2Q9C040 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRIM2Q9C040 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.46■□□□□ 0.06
TRIM2Q9C040 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 HLA-A-201ENST00000376802 1334 ntBASIC15.45■□□□□ 0.06
TRIM2Q9C040 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 LAGE3P1-201ENST00000425356 484 ntBASIC15.45■□□□□ 0.06
TRIM2Q9C040 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 AC079776.4-201ENST00000511039 504 ntBASIC15.45■□□□□ 0.06
TRIM2Q9C040 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRIM2Q9C040 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRIM2Q9C040 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM2Q9C040 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
TRIM2Q9C040 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM2Q9C040 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
TRIM2Q9C040 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
TRIM2Q9C040 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
TRIM2Q9C040 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms