Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AL391256.1-201ENST00000443260 1855 ntBASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 DAP-202ENST00000432074 1048 ntTSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AC104076.2-201ENST00000448912 469 ntBASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AC022616.7-201ENST00000525383 220 ntBASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC14.4□□□□□ -0.1
CMSS1Q9BQ75 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.11
CMSS1Q9BQ75 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.4□□□□□ -0.11
CMSS1Q9BQ75 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 AL645728.1-201ENST00000366221 2101 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 AC011467.2-201ENST00000598425 242 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 AD001527.2-201ENST00000622994 785 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 PAUPAR-201ENST00000630360 2965 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 AL513523.2-202ENST00000427283 2040 ntBASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CMSS1Q9BQ75 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms