Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PTPN18Q99952 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPN18Q99952 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC18.95■□□□□ 0.62
PTPN18Q99952 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PTPN18Q99952 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN18Q99952 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN18Q99952 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN18Q99952 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN18Q99952 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN18Q99952 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN18Q99952 MIR6869-201ENST00000619434 62 ntBASIC18.95■□□□□ 0.62
PTPN18Q99952 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN18Q99952 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PTPN18Q99952 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN18Q99952 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PTPN18Q99952 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
PTPN18Q99952 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
PTPN18Q99952 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PTPN18Q99952 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN18Q99952 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN18Q99952 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.94■□□□□ 0.62
PTPN18Q99952 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN18Q99952 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PTPN18Q99952 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN18Q99952 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN18Q99952 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN18Q99952 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.94■□□□□ 0.62
PTPN18Q99952 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.94■□□□□ 0.62
PTPN18Q99952 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN18Q99952 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
PTPN18Q99952 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 AC092337.1-201ENST00000568699 1129 ntBASIC18.93■□□□□ 0.62
PTPN18Q99952 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN18Q99952 BTNL10-201ENST00000595971 695 ntBASIC18.93■□□□□ 0.62
PTPN18Q99952 AC013467.2-201ENST00000605472 835 ntBASIC18.93■□□□□ 0.62
PTPN18Q99952 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN18Q99952 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN18Q99952 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
PTPN18Q99952 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 KRT8P39-201ENST00000396270 1433 ntBASIC18.92■□□□□ 0.62
PTPN18Q99952 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN18Q99952 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN18Q99952 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PTPN18Q99952 AL589702.1-201ENST00000641229 1509 ntBASIC18.92■□□□□ 0.62
PTPN18Q99952 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN18Q99952 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms