Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RAB3IPQ96QF0 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 AC009154.2-201ENST00000621177 724 ntBASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB3IPQ96QF0 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.39■□□□□ 0.22
RAB3IPQ96QF0 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 PVRIG2P-201ENST00000435460 978 ntBASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 AP003041.3-201ENST00000527151 707 ntBASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB3IPQ96QF0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RAB3IPQ96QF0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms