Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AC005052.1-201ENST00000625181 2492 ntBASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AL590627.1-203ENST00000421194 1026 ntBASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AL513480.1-201ENST00000451731 511 ntBASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 AC096734.2-201ENST00000562054 433 ntBASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 ME2P1-201ENST00000426028 1970 ntBASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.26■□□□□ 0.35
CSPG4P5Q96PW8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 HMGA1P7-201ENST00000406908 502 ntBASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CSPG4P5Q96PW8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 AC006449.5-201ENST00000610658 2098 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 RHOQP3-201ENST00000437982 621 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 SLC25A1P1-201ENST00000528351 927 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 BX640515.1-201ENST00000617215 977 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 AL645728.2-201ENST00000641974 660 ntBASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CSPG4P5Q96PW8 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms