Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AF228730.7-201ENST00000641842 219 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL671710.1-201ENST00000610245 2349 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 KRT8P39-201ENST00000396270 1433 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AL512652.2-201ENST00000625156 1716 ntBASIC12.17□□□□□ -0.46
C9orf85Q96MD7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
C9orf85Q96MD7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AC087163.2-201ENST00000457299 853 ntBASIC12.16□□□□□ -0.46
C9orf85Q96MD7 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 AC139887.3-201ENST00000568585 713 ntBASIC12.16□□□□□ -0.46
C9orf85Q96MD7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.16□□□□□ -0.46
C9orf85Q96MD7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 REXO1L3P-201ENST00000622202 1288 ntBASIC12.16□□□□□ -0.46
C9orf85Q96MD7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
C9orf85Q96MD7 CICP6-201ENST00000457191 2729 ntBASIC12.16□□□□□ -0.46
C9orf85Q96MD7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 AL031731.1-201ENST00000642131 2094 ntBASIC12.15□□□□□ -0.46
C9orf85Q96MD7 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
C9orf85Q96MD7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms