Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
DDX11Q96FC9 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX11Q96FC9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 MRPL20P1-201ENST00000400819 433 ntBASIC19.92■□□□□ 0.78
DDX11Q96FC9 PTCHD3P3-201ENST00000403073 906 ntBASIC19.92■□□□□ 0.78
DDX11Q96FC9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AL596442.2-201ENST00000610240 980 ntBASIC19.92■□□□□ 0.78
DDX11Q96FC9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 AL805961.1-202ENST00000641562 540 ntBASIC19.92■□□□□ 0.78
DDX11Q96FC9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX11Q96FC9 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX11Q96FC9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX11Q96FC9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX11Q96FC9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ATP6V0CP3-201ENST00000417255 467 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AL353135.1-201ENST00000606729 504 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 AC010654.1-201ENST00000615722 808 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 GGTLC5P-201ENST00000617623 998 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 AL513190.1-201ENST00000621254 727 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AL590787.1-201ENST00000568856 1315 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.9■□□□□ 0.78
DDX11Q96FC9 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DDX11Q96FC9 AL645728.1-201ENST00000366221 2101 ntBASIC19.9■□□□□ 0.78
DDX11Q96FC9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms