Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 KRT18P34-201ENST00000488218 1270 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SLC25A39P2-201ENST00000537614 270 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 AP000842.3-202ENST00000569238 1080 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 AC106820.2-201ENST00000563775 3264 ntBASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PGBD4Q96DM1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 AC141586.5-201ENST00000624546 2050 ntBASIC18.11■□□□□ 0.49
PGBD4Q96DM1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 MIR346-201ENST00000362234 95 ntBASIC18.11■□□□□ 0.49
PGBD4Q96DM1 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 KLF2P3-201ENST00000451977 1087 ntBASIC18.11■□□□□ 0.49
PGBD4Q96DM1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 RNA5SP421-201ENST00000516864 134 ntBASIC18.11■□□□□ 0.49
PGBD4Q96DM1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 AC051619.7-201ENST00000568314 623 ntBASIC18.11■□□□□ 0.49
PGBD4Q96DM1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
PGBD4Q96DM1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 AL645608.8-201ENST00000606034 2086 ntBASIC18.1■□□□□ 0.49
PGBD4Q96DM1 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 BCRP1-201ENST00000444246 691 ntBASIC18.1■□□□□ 0.49
PGBD4Q96DM1 DUX4L27-201ENST00000554796 1261 ntBASIC18.1■□□□□ 0.49
PGBD4Q96DM1 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 AC005498.2-205ENST00000593218 784 ntBASIC18.1■□□□□ 0.49
PGBD4Q96DM1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.1■□□□□ 0.49
PGBD4Q96DM1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms