Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 KRT18P2-201ENST00000447938 1258 ntBASIC12.5□□□□□ -0.41
RNF183Q96D59 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF183Q96D59 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.5□□□□□ -0.41
RNF183Q96D59 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.5□□□□□ -0.41
RNF183Q96D59 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.5□□□□□ -0.41
RNF183Q96D59 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 AC002310.6-201ENST00000624451 1377 ntBASIC12.5□□□□□ -0.41
RNF183Q96D59 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF183Q96D59 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.5□□□□□ -0.41
RNF183Q96D59 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF183Q96D59 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 LYSMD4-203ENST00000378904 2122 ntBASIC12.5□□□□□ -0.41
RNF183Q96D59 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC12.5□□□□□ -0.41
RNF183Q96D59 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
RNF183Q96D59 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RNF183Q96D59 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 AC008741.2-201ENST00000612792 3115 ntBASIC12.49□□□□□ -0.41
RNF183Q96D59 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 RPSAP43-201ENST00000402237 625 ntBASIC12.49□□□□□ -0.41
RNF183Q96D59 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF183Q96D59 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.49□□□□□ -0.41
RNF183Q96D59 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 AC010327.4-202ENST00000591484 748 ntBASIC12.49□□□□□ -0.41
RNF183Q96D59 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC12.49□□□□□ -0.41
RNF183Q96D59 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.49□□□□□ -0.41
RNF183Q96D59 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 AL355312.1-201ENST00000407115 2176 ntBASIC12.49□□□□□ -0.41
RNF183Q96D59 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.49□□□□□ -0.41
RNF183Q96D59 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RNF183Q96D59 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
RNF183Q96D59 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC12.48□□□□□ -0.41
RNF183Q96D59 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RNF183Q96D59 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.48□□□□□ -0.41
RNF183Q96D59 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms