Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
TMEM54Q969K7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TMEM54Q969K7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.74□□□□□ -0.05
TMEM54Q969K7 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 AC025580.3-201ENST00000617932 1424 ntBASIC14.74□□□□□ -0.05
TMEM54Q969K7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TMEM54Q969K7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 ME2P1-201ENST00000426028 1970 ntBASIC14.73□□□□□ -0.05
TMEM54Q969K7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PMS2P4-201ENST00000412466 1052 ntBASIC14.73□□□□□ -0.05
TMEM54Q969K7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 KRT19P2-202ENST00000557173 1012 ntBASIC14.73□□□□□ -0.05
TMEM54Q969K7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 AC140113.2-201ENST00000604370 208 ntBASIC14.73□□□□□ -0.05
TMEM54Q969K7 AC021097.1-201ENST00000607902 574 ntBASIC14.73□□□□□ -0.05
TMEM54Q969K7 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
TMEM54Q969K7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TMEM54Q969K7 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TMEM54Q969K7 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
TMEM54Q969K7 MED15P5-201ENST00000423150 992 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms