Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 ACTG1P4-201ENST00000425123 1122 ntBASIC17.25■□□□□ 0.35
SCG3Q8WXD2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 AC060834.1-201ENST00000443027 2032 ntBASIC17.25■□□□□ 0.35
SCG3Q8WXD2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SCG3Q8WXD2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AL020989.1-201ENST00000422979 469 ntBASIC17.24■□□□□ 0.35
SCG3Q8WXD2 SIGLEC30P-201ENST00000455569 941 ntBASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AC092865.5-201ENST00000545435 363 ntBASIC17.24■□□□□ 0.35
SCG3Q8WXD2 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 Z83851.2-201ENST00000609564 659 ntBASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SCG3Q8WXD2 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SCG3Q8WXD2 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms