Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 CALR4P-201ENST00000431943 946 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 APRT-204ENST00000563655 709 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC093724.1-201ENST00000448659 1027 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 TIMM17BP1-201ENST00000545713 516 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 GNRHR2-203ENST00000581100 1187 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC024267.1-201ENST00000582320 895 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 AC092978.1-202ENST00000637590 1327 ntBASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
ALMS1Q8TCU4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC124283.3-201ENST00000570869 594 ntBASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC013467.2-201ENST00000605472 835 ntBASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AL021920.2-201ENST00000624828 1351 ntBASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GPAA1P2-201ENST00000417923 928 ntBASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 AC004408.2-201ENST00000623613 2777 ntBASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC11.07□□□□□ -0.64
ALMS1Q8TCU4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 CLUHP6-201ENST00000580789 941 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AL671710.1-201ENST00000610245 2349 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 RN7SL560P-201ENST00000577943 264 ntBASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
ALMS1Q8TCU4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms