Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 TSSK5P-201ENST00000423978 907 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC142381.1-201ENST00000426099 345 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 NME2P1-201ENST00000426182 414 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 HLA-V-204ENST00000476601 1289 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 AC022144.1-201ENST00000602255 1580 ntBASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SYNPOQ8N3V7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 KRT18P34-201ENST00000488218 1270 ntBASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AL596325.1-201ENST00000563991 1082 ntBASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 AC004233.3-201ENST00000607794 1269 ntBASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SYNPOQ8N3V7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SYNPOQ8N3V7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.96■□□□□ 0.3
SYNPOQ8N3V7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SYNPOQ8N3V7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AP3S2-216ENST00000617003 1561 ntBASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AL035456.1-201ENST00000456064 1369 ntBASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AL021920.2-201ENST00000624828 1351 ntBASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AL138918.1-201ENST00000568306 659 ntBASIC16.95■□□□□ 0.3
SYNPOQ8N3V7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms