Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 RNA5SP419-201ENST00000515908 135 ntBASIC16.21■□□□□ 0.19
KRT78Q8N1N4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 MIR4751-201ENST00000578027 74 ntBASIC16.21■□□□□ 0.19
KRT78Q8N1N4 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 AC010654.1-201ENST00000615722 808 ntBASIC16.21■□□□□ 0.19
KRT78Q8N1N4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
KRT78Q8N1N4 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT78Q8N1N4 FLJ38576-201ENST00000623820 2459 ntBASIC16.21■□□□□ 0.18
KRT78Q8N1N4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
KRT78Q8N1N4 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.21■□□□□ 0.18
KRT78Q8N1N4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
KRT78Q8N1N4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 AC131009.4-201ENST00000624048 1740 ntBASIC16.2■□□□□ 0.18
KRT78Q8N1N4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 HLA-J-202ENST00000469281 1241 ntBASIC16.2■□□□□ 0.18
KRT78Q8N1N4 AC107918.2-201ENST00000530817 355 ntBASIC16.2■□□□□ 0.18
KRT78Q8N1N4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 AL603756.1-201ENST00000606511 2163 ntBASIC16.2■□□□□ 0.18
KRT78Q8N1N4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KRT78Q8N1N4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 HLA-A-201ENST00000376802 1334 ntBASIC16.19■□□□□ 0.18
KRT78Q8N1N4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 HCG4-201ENST00000418983 998 ntBASIC16.19■□□□□ 0.18
KRT78Q8N1N4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 UNC93B6-202ENST00000528242 690 ntBASIC16.19■□□□□ 0.18
KRT78Q8N1N4 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.19■□□□□ 0.18
KRT78Q8N1N4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KRT78Q8N1N4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms