Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 MIR4492-201ENST00000581627 80 ntBASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 AL512652.2-201ENST00000625156 1716 ntBASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 AL513523.2-202ENST00000427283 2040 ntBASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC83Q8IWF9 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 LAGE3P1-201ENST00000425356 484 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 UNC93B7-201ENST00000509439 705 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AL805961.1-202ENST00000641562 540 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AC107918.4-202ENST00000641623 219 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AF228730.7-201ENST00000641842 219 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 GGT3P-204ENST00000453783 1664 ntBASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC83Q8IWF9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms