Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AC005412.3-201ENST00000580309 715 ntBASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AC008667.4-201ENST00000607370 168 ntBASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 AP001350.2-201ENST00000625104 1094 ntBASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDKL3Q8IVW4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PMS2P1-201ENST00000431037 1228 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 FAM197Y8-203ENST00000450145 560 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 EMBP1-201ENST00000458200 901 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AF186996.4-201ENST00000467186 377 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AC105339.3-201ENST00000560043 636 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 CYP2A7P1-201ENST00000595391 815 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AL121912.1-201ENST00000603683 238 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 SLC22A20-204ENST00000530038 1673 ntBASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.22■□□□□ 0.35
CDKL3Q8IVW4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AC129492.6-201ENST00000611383 1305 ntBASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AL512652.2-201ENST00000625156 1716 ntBASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AC018712.1-201ENST00000455767 687 ntBASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AC087641.1-201ENST00000557561 1021 ntBASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CDKL3Q8IVW4 AL356488.2-201ENST00000602755 427 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms