Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 AC009533.2-201ENST00000543664 586 ntBASIC14.99□□□□□ -0.01
LRRC28Q86X40 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 AC005336.2-201ENST00000593183 939 ntBASIC14.99□□□□□ -0.01
LRRC28Q86X40 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
LRRC28Q86X40 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRRC28Q86X40 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 AP002490.2-201ENST00000524791 560 ntBASIC14.98□□□□□ -0.01
LRRC28Q86X40 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 BNIP3P18-201ENST00000593976 575 ntBASIC14.98□□□□□ -0.01
LRRC28Q86X40 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 AL138831.2-201ENST00000606564 490 ntBASIC14.98□□□□□ -0.01
LRRC28Q86X40 AL732292.2-201ENST00000609649 430 ntBASIC14.98□□□□□ -0.01
LRRC28Q86X40 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 AC125634.1-201ENST00000438758 1403 ntBASIC14.98□□□□□ -0.01
LRRC28Q86X40 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRRC28Q86X40 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LRRC28Q86X40 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 UNC93B7-201ENST00000509439 705 ntBASIC14.97□□□□□ -0.01
LRRC28Q86X40 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 AC006538.1-201ENST00000567905 1585 ntBASIC14.97□□□□□ -0.01
LRRC28Q86X40 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
LRRC28Q86X40 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LRRC28Q86X40 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.96□□□□□ -0.01
LRRC28Q86X40 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LRRC28Q86X40 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LRRC28Q86X40 AC097374.2-201ENST00000618617 1306 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms