Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 PFAS-212ENST00000625942 396 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ACTBP11-201ENST00000436287 1126 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 DOC2GP-202ENST00000514950 1163 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC055876.2-201ENST00000531834 546 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 AP005482.1-201ENST00000563722 1273 ntBASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MIR8072-201ENST00000614241 80 ntBASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 AC044860.1-202ENST00000559481 777 ntBASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 AC010319.3-201ENST00000597028 470 ntBASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC10.18□□□□□ -0.78
VPS13BQ7Z7G8 TOP3BP1-201ENST00000420768 1380 ntBASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
VPS13BQ7Z7G8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms