Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 AL845331.1-201ENST00000424978 1190 ntBASIC15.65■□□□□ 0.1
RFX4Q33E94 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
RFX4Q33E94 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.65■□□□□ 0.1
RFX4Q33E94 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.65■□□□□ 0.1
RFX4Q33E94 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
RFX4Q33E94 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
RFX4Q33E94 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.64■□□□□ 0.1
RFX4Q33E94 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
RFX4Q33E94 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC002310.6-201ENST00000624451 1377 ntBASIC15.64■□□□□ 0.09
RFX4Q33E94 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.64■□□□□ 0.09
RFX4Q33E94 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RFX4Q33E94 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC022616.7-201ENST00000525383 220 ntBASIC15.64■□□□□ 0.09
RFX4Q33E94 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.64■□□□□ 0.09
RFX4Q33E94 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC011498.5-201ENST00000592027 486 ntBASIC15.64■□□□□ 0.09
RFX4Q33E94 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 AC099063.4-201ENST00000641099 1602 ntBASIC15.64■□□□□ 0.09
RFX4Q33E94 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
RFX4Q33E94 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.64■□□□□ 0.09
RFX4Q33E94 AL603832.2-201ENST00000566195 2125 ntBASIC15.64■□□□□ 0.09
RFX4Q33E94 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RFX4Q33E94 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RFX4Q33E94 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms