Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CCR12P-201ENST00000446203 998 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 MTCL1P1-201ENST00000446207 792 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 AC113410.3-201ENST00000623366 203 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CICP24-201ENST00000605464 2705 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 LINC00895-201ENST00000629028 1637 ntBASIC17.8■□□□□ 0.44
ERCC6LQ2NKX8 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 AC104581.4-201ENST00000623126 3052 ntBASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.79■□□□□ 0.44
ERCC6LQ2NKX8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 CDC14C-201ENST00000428251 1719 ntBASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.78■□□□□ 0.44
ERCC6LQ2NKX8 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms