Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RFX7Q2KHR2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AC084121.4-201ENST00000641598 221 ntBASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AF228730.8-201ENST00000642140 221 ntBASIC20.15■□□□□ 0.82
RFX7Q2KHR2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RFX7Q2KHR2 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC20.14■□□□□ 0.82
RFX7Q2KHR2 GPAA1P2-202ENST00000606848 1787 ntBASIC20.14■□□□□ 0.81
RFX7Q2KHR2 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 LINC01225-203ENST00000563550 1244 ntBASIC20.14■□□□□ 0.81
RFX7Q2KHR2 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 Z92544.3-201ENST00000624747 417 ntBASIC20.14■□□□□ 0.81
RFX7Q2KHR2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 FZD10-202ENST00000539839 3282 ntBASIC20.14■□□□□ 0.81
RFX7Q2KHR2 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RFX7Q2KHR2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 KRT18P32-201ENST00000424695 1287 ntBASIC20.13■□□□□ 0.81
RFX7Q2KHR2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AC051619.7-201ENST00000568314 623 ntBASIC20.13■□□□□ 0.81
RFX7Q2KHR2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.13■□□□□ 0.81
RFX7Q2KHR2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms