Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.4■□□□□ 0.54
KCNA1Q09470 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
KCNA1Q09470 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
KCNA1Q09470 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.4■□□□□ 0.54
KCNA1Q09470 RNA5SP416-201ENST00000516838 111 ntBASIC18.4■□□□□ 0.54
KCNA1Q09470 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.4■□□□□ 0.54
KCNA1Q09470 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.4■□□□□ 0.54
KCNA1Q09470 AC023141.13-201ENST00000604991 943 ntBASIC18.4■□□□□ 0.54
KCNA1Q09470 AL139011.1-202ENST00000642063 584 ntBASIC18.4■□□□□ 0.54
KCNA1Q09470 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.4■□□□□ 0.54
KCNA1Q09470 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KCNA1Q09470 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.4■□□□□ 0.54
KCNA1Q09470 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.4■□□□□ 0.54
KCNA1Q09470 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
KCNA1Q09470 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.4■□□□□ 0.54
KCNA1Q09470 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNA1Q09470 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNA1Q09470 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC18.4■□□□□ 0.54
KCNA1Q09470 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
KCNA1Q09470 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
KCNA1Q09470 KRT8P39-201ENST00000396270 1433 ntBASIC18.4■□□□□ 0.54
KCNA1Q09470 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
KCNA1Q09470 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
KCNA1Q09470 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
KCNA1Q09470 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.39■□□□□ 0.53
KCNA1Q09470 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 KRT18P58-201ENST00000527480 1120 ntBASIC18.39■□□□□ 0.53
KCNA1Q09470 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
KCNA1Q09470 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.39■□□□□ 0.53
KCNA1Q09470 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.39■□□□□ 0.53
KCNA1Q09470 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
KCNA1Q09470 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.39■□□□□ 0.53
KCNA1Q09470 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.39■□□□□ 0.53
KCNA1Q09470 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.39■□□□□ 0.53
KCNA1Q09470 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 AL031731.1-201ENST00000642131 2094 ntBASIC18.38■□□□□ 0.53
KCNA1Q09470 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNA1Q09470 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.38■□□□□ 0.53
KCNA1Q09470 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 AC124067.4-201ENST00000519691 2379 ntBASIC18.38■□□□□ 0.53
KCNA1Q09470 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNA1Q09470 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.38■□□□□ 0.53
KCNA1Q09470 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 AL031432.2-201ENST00000566714 459 ntBASIC18.38■□□□□ 0.53
KCNA1Q09470 AL928711.1-201ENST00000570165 459 ntBASIC18.38■□□□□ 0.53
KCNA1Q09470 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KCNA1Q09470 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
KCNA1Q09470 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNA1Q09470 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
KCNA1Q09470 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
KCNA1Q09470 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.38■□□□□ 0.53
KCNA1Q09470 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
KCNA1Q09470 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
KCNA1Q09470 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 AL118508.1-201ENST00000613502 2345 ntBASIC18.37■□□□□ 0.53
KCNA1Q09470 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KCNA1Q09470 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.37■□□□□ 0.53
KCNA1Q09470 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.37■□□□□ 0.53
KCNA1Q09470 AL645728.2-201ENST00000641974 660 ntBASIC18.37■□□□□ 0.53
KCNA1Q09470 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms