Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX6-1P78426 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX6-1P78426 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX6-1P78426 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 AL031432.2-201ENST00000566714 459 ntBASIC14.83□□□□□ -0.04
NKX6-1P78426 AL928711.1-201ENST00000570165 459 ntBASIC14.83□□□□□ -0.04
NKX6-1P78426 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NKX6-1P78426 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX6-1P78426 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX6-1P78426 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX6-1P78426 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 MST1L-201ENST00000442552 2185 ntBASIC14.83□□□□□ -0.04
NKX6-1P78426 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX6-1P78426 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 AL162727.3-201ENST00000635661 2787 ntBASIC14.82□□□□□ -0.04
NKX6-1P78426 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX6-1P78426 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 AC092474.2-201ENST00000424288 719 ntBASIC14.82□□□□□ -0.04
NKX6-1P78426 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX6-1P78426 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX6-1P78426 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.82□□□□□ -0.04
NKX6-1P78426 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.82□□□□□ -0.04
NKX6-1P78426 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 AC027612.4-201ENST00000605371 583 ntBASIC14.82□□□□□ -0.04
NKX6-1P78426 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.82□□□□□ -0.04
NKX6-1P78426 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NKX6-1P78426 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.82□□□□□ -0.04
NKX6-1P78426 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 FLJ16779-201ENST00000612722 7638 ntBASIC14.82□□□□□ -0.04
NKX6-1P78426 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NKX6-1P78426 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NKX6-1P78426 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.81□□□□□ -0.04
NKX6-1P78426 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX6-1P78426 ACTG1P14-201ENST00000446382 1122 ntBASIC14.81□□□□□ -0.04
NKX6-1P78426 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-1P78426 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.81□□□□□ -0.04
NKX6-1P78426 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 AP000344.2-201ENST00000512987 629 ntBASIC14.81□□□□□ -0.04
NKX6-1P78426 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX6-1P78426 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NKX6-1P78426 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX6-1P78426 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX6-1P78426 PDPK2P-202ENST00000562415 1191 ntBASIC14.81□□□□□ -0.04
NKX6-1P78426 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-1P78426 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
NKX6-1P78426 AC004877.2-201ENST00000623941 599 ntBASIC14.81□□□□□ -0.04
NKX6-1P78426 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms