Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 HLA-J-202ENST00000469281 1241 ntBASIC16.44■□□□□ 0.22
CDH13P55290 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH13P55290 AL139424.1-201ENST00000607572 797 ntBASIC16.44■□□□□ 0.22
CDH13P55290 AL139288.1-201ENST00000623748 933 ntBASIC16.44■□□□□ 0.22
CDH13P55290 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.44■□□□□ 0.22
CDH13P55290 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.44■□□□□ 0.22
CDH13P55290 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
CDH13P55290 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CDH13P55290 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CDH13P55290 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.43■□□□□ 0.22
CDH13P55290 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 AL513523.2-202ENST00000427283 2040 ntBASIC16.43■□□□□ 0.22
CDH13P55290 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 MIR1224-201ENST00000408193 85 ntBASIC16.43■□□□□ 0.22
CDH13P55290 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 UPK3BP1-201ENST00000428678 509 ntBASIC16.43■□□□□ 0.22
CDH13P55290 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH13P55290 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CDH13P55290 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 SART3-203ENST00000546611 1184 ntBASIC16.43■□□□□ 0.22
CDH13P55290 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.43■□□□□ 0.22
CDH13P55290 MIR3652-201ENST00000579335 131 ntBASIC16.43■□□□□ 0.22
CDH13P55290 AC013467.2-201ENST00000605472 835 ntBASIC16.43■□□□□ 0.22
CDH13P55290 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 AL671710.1-201ENST00000610245 2349 ntBASIC16.43■□□□□ 0.22
CDH13P55290 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CDH13P55290 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 PAUPAR-201ENST00000630360 2965 ntBASIC16.43■□□□□ 0.22
CDH13P55290 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CDH13P55290 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CDH13P55290 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CDH13P55290 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CDH13P55290 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH13P55290 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH13P55290 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.42■□□□□ 0.22
CDH13P55290 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH13P55290 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CDH13P55290 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.42■□□□□ 0.22
CDH13P55290 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.42■□□□□ 0.22
CDH13P55290 AL589182.2-201ENST00000619332 1049 ntBASIC16.42■□□□□ 0.22
CDH13P55290 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.42■□□□□ 0.22
CDH13P55290 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.42■□□□□ 0.22
CDH13P55290 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CDH13P55290 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms