Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC25A1P53007 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC25A1P53007 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC25A1P53007 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC25A1P53007 POU5F1P6-201ENST00000466990 990 ntBASIC14.9□□□□□ -0.02
SLC25A1P53007 SLC25A6P2-201ENST00000497974 877 ntBASIC14.9□□□□□ -0.02
SLC25A1P53007 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC25A1P53007 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SLC25A1P53007 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC25A1P53007 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC25A1P53007 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC25A1P53007 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC25A1P53007 AL353732.1-201ENST00000569618 1459 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 LINC01144-201ENST00000626198 1710 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC25A1P53007 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.89□□□□□ -0.03
SLC25A1P53007 TSPY19P-201ENST00000418461 509 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 PMS2P1-201ENST00000431037 1228 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.89□□□□□ -0.03
SLC25A1P53007 TSPY18P-201ENST00000441642 509 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 CYP2A7P1-201ENST00000595391 815 ntBASIC14.89□□□□□ -0.03
SLC25A1P53007 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.89□□□□□ -0.03
SLC25A1P53007 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
SLC25A1P53007 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.89□□□□□ -0.03
SLC25A1P53007 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SLC25A1P53007 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms