Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.358e-10■□□□□ 9
NCBP2P52298 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.358e-10■□□□□ 9
NCBP2P52298 RPS9-206ENST00000436445 752 ntTSL 212.87□□□□□ -0.358e-10■□□□□ 9
NCBP2P52298 RPS9-208ENST00000445961 944 ntTSL 512.87□□□□□ -0.358e-10■□□□□ 9
NCBP2P52298 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC12.55□□□□□ -0.48e-10■□□□□ 9
NCBP2P52298 RPS9-211ENST00000484121 897 ntTSL 212.31□□□□□ -0.448e-10■□□□□ 9
NCBP2P52298 RPS9-212ENST00000495002 956 ntTSL 1 (best)11.93□□□□□ -0.58e-10■□□□□ 9
NCBP2P52298 RPS9-213ENST00000626547 476 ntTSL 2 BASIC11.71□□□□□ -0.538e-10■□□□□ 9
NCBP2P52298 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.792e-54■□□□□ 9
NCBP2P52298 PEG3-203ENST00000594389 411 ntTSL 319.86■□□□□ 0.772e-54■□□□□ 9
NCBP2P52298 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.622e-54■□□□□ 9
NCBP2P52298 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.582e-54■□□□□ 9
NCBP2P52298 PEG3-204ENST00000594706 583 ntTSL 316.92■□□□□ 0.32e-54■□□□□ 9
NCBP2P52298 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.08■□□□□ 0.162e-54■□□□□ 9
NCBP2P52298 PEG3-209ENST00000599577 5052 ntAPPRIS P1 TSL 1 (best)15.09■□□□□ 0.012e-54■□□□□ 9
NCBP2P52298 PEG3-202ENST00000593695 4741 ntTSL 1 (best) BASIC11.73□□□□□ -0.532e-54■□□□□ 9
NCBP2P52298 PEG3-201ENST00000326441 8723 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.992e-54■□□□□ 9
NCBP2P52298 PEG3-205ENST00000596261 570 ntTSL 47.72□□□□□ -1.172e-54■□□□□ 9
NCBP2P52298 AC010654.1-201ENST00000615722 808 ntBASIC15.76■□□□□ 0.114e-7■□□□□ 9
NCBP2P52298 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.222e-8■□□□□ 9
NCBP2P52298 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.074e-9■□□□□ 9
NCBP2P52298 GMNN-205ENST00000468943 679 ntTSL 214.59□□□□□ -0.074e-9■□□□□ 9
NCBP2P52298 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.634e-9■□□□□ 9
NCBP2P52298 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.334e-8■□□□□ 8.9
NCBP2P52298 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.661e-7■□□□□ 8.9
NCBP2P52298 HDAC3-213ENST00000492506 830 ntTSL 211.56□□□□□ -0.561e-7■□□□□ 8.9
NCBP2P52298 HDAC3-214ENST00000495485 797 ntTSL 39.69□□□□□ -0.861e-7■□□□□ 8.9
NCBP2P52298 HDAC3-215ENST00000519474 736 ntTSL 38.53□□□□□ -1.041e-7■□□□□ 8.9
NCBP2P52298 HDAC3-216ENST00000523088 699 ntTSL 36.06□□□□□ -1.441e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-210ENST00000555652 379 ntTSL 321.42■■□□□ 1.021e-7■□□□□ 8.9
NCBP2P52298 ZNF580-206ENST00000592881 1019 ntTSL 319.35■□□□□ 0.691e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-212ENST00000555989 569 ntTSL 418.16■□□□□ 0.51e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-204ENST00000553453 521 ntTSL 517.9■□□□□ 0.461e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-214ENST00000556780 591 ntTSL 517.41■□□□□ 0.381e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-206ENST00000517980 696 ntTSL 415.67■□□□□ 0.11e-7■□□□□ 8.9
NCBP2P52298 PTPN23-202ENST00000456221 592 ntTSL 414.28□□□□□ -0.121e-7■□□□□ 8.9
NCBP2P52298 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.231e-7■□□□□ 8.9
NCBP2P52298 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.331e-7■□□□□ 8.9
NCBP2P52298 PTPN23-206ENST00000602307 5119 ntTSL 211.82□□□□□ -0.521e-7■□□□□ 8.9
NCBP2P52298 ZC3H15-206ENST00000477672 304 ntTSL 311.45□□□□□ -0.581e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-211ENST00000518910 572 ntTSL 411.4□□□□□ -0.581e-7■□□□□ 8.9
NCBP2P52298 ZC3H15-203ENST00000437396 556 ntTSL 410.3□□□□□ -0.761e-7■□□□□ 8.9
NCBP2P52298 PTPN23-203ENST00000462998 260 ntTSL 310.12□□□□□ -0.791e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-234ENST00000522227 642 ntTSL 39.51□□□□□ -0.891e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-230ENST00000521724 2741 ntTSL 28.85□□□□□ -0.991e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-221ENST00000520339 868 ntTSL 38.37□□□□□ -1.071e-7■□□□□ 8.9
NCBP2P52298 ZKSCAN8-204ENST00000606198 2057 ntTSL 1 (best)8.14□□□□□ -1.111e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-240ENST00000523912 545 ntTSL 48.08□□□□□ -1.121e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-213ENST00000556408 903 ntTSL 38.07□□□□□ -1.121e-7■□□□□ 8.9
NCBP2P52298 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.171e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-231ENST00000521941 224 ntTSL 37.73□□□□□ -1.171e-7■□□□□ 8.9
NCBP2P52298 ZC3H15-201ENST00000337859 2138 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.181e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-215ENST00000519309 869 ntTSL 37.35□□□□□ -1.231e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.271e-7■□□□□ 8.9
NCBP2P52298 ZC3H15-202ENST00000421536 1101 ntTSL 27□□□□□ -1.291e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC6.7□□□□□ -1.341e-7■□□□□ 8.9
NCBP2P52298 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.631e-7■□□□□ 8.9
NCBP2P52298 CTNNA1-241ENST00000524127 483 ntTSL 44.56□□□□□ -1.681e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-206ENST00000554362 552 ntTSL 52.53□□□□□ -21e-7■□□□□ 8.9
NCBP2P52298 SIPA1L1-205ENST00000554126 576 ntTSL 50.59□□□□□ -2.311e-7■□□□□ 8.9
NCBP2P52298 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.94e-11■□□□□ 8.9
NCBP2P52298 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.87□□□□□ -0.194e-11■□□□□ 8.9
NCBP2P52298 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.224e-11■□□□□ 8.9
NCBP2P52298 COA1-212ENST00000448704 1599 ntTSL 1 (best)17.01■□□□□ 0.311e-7■□□□□ 8.9
NCBP2P52298 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.63■□□□□ 0.092e-9■□□□□ 8.9
NCBP2P52298 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.88□□□□□ -0.032e-9■□□□□ 8.9
NCBP2P52298 GMPR2-229ENST00000561038 2160 ntTSL 1 (best)13.81□□□□□ -0.22e-9■□□□□ 8.9
NCBP2P52298 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.53□□□□□ -0.242e-9■□□□□ 8.9
NCBP2P52298 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.242e-9■□□□□ 8.9
NCBP2P52298 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.25□□□□□ -0.292e-9■□□□□ 8.9
NCBP2P52298 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC12.37□□□□□ -0.432e-9■□□□□ 8.9
NCBP2P52298 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC12.25□□□□□ -0.452e-9■□□□□ 8.9
NCBP2P52298 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC11.75□□□□□ -0.532e-9■□□□□ 8.9
NCBP2P52298 COA1-206ENST00000418140 1372 ntTSL 1 (best)11.69□□□□□ -0.541e-7■□□□□ 8.9
NCBP2P52298 GMPR2-218ENST00000559287 1748 ntTSL 1 (best)11.6□□□□□ -0.552e-9■□□□□ 8.9
NCBP2P52298 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.552e-9■□□□□ 8.9
NCBP2P52298 GMPR2-214ENST00000558865 735 ntTSL 510.57□□□□□ -0.722e-9■□□□□ 8.9
NCBP2P52298 GMPR2-226ENST00000560139 583 ntTSL 510.26□□□□□ -0.772e-9■□□□□ 8.9
NCBP2P52298 COA1-208ENST00000431651 720 ntAPPRIS ALT2 TSL 310.09□□□□□ -0.791e-7■□□□□ 8.9
NCBP2P52298 COA1-214ENST00000457939 406 ntTSL 39.86□□□□□ -0.831e-7■□□□□ 8.9
NCBP2P52298 COA1-213ENST00000451651 585 ntTSL 39.82□□□□□ -0.841e-7■□□□□ 8.9
NCBP2P52298 COA1-217ENST00000478504 552 ntTSL 49.71□□□□□ -0.861e-7■□□□□ 8.9
NCBP2P52298 COA1-202ENST00000310564 1085 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.881e-7■□□□□ 8.9
NCBP2P52298 COA1-205ENST00000415798 524 ntAPPRIS ALT2 TSL 48.97□□□□□ -0.971e-7■□□□□ 8.9
NCBP2P52298 GMPR2-203ENST00000399440 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.032e-9■□□□□ 8.9
NCBP2P52298 COA1-209ENST00000438444 3223 ntTSL 28.33□□□□□ -1.081e-7■□□□□ 8.9
NCBP2P52298 GMPR2-222ENST00000559801 466 ntTSL 28.18□□□□□ -1.12e-9■□□□□ 8.9
NCBP2P52298 GMPR2-228ENST00000561035 877 ntTSL 58.18□□□□□ -1.12e-9■□□□□ 8.9
NCBP2P52298 COA1-204ENST00000415076 1737 ntTSL 37.82□□□□□ -1.161e-7■□□□□ 8.9
NCBP2P52298 GMPR2-212ENST00000558760 817 ntTSL 27.68□□□□□ -1.182e-9■□□□□ 8.9
NCBP2P52298 COA1-210ENST00000446330 1520 ntTSL 27.47□□□□□ -1.211e-7■□□□□ 8.9
NCBP2P52298 COA1-211ENST00000446564 1177 ntTSL 27.32□□□□□ -1.241e-7■□□□□ 8.9
NCBP2P52298 GMPR2-216ENST00000559102 721 ntTSL 36.75□□□□□ -1.332e-9■□□□□ 8.9
NCBP2P52298 GMPR2-230ENST00000561130 842 ntTSL 36.65□□□□□ -1.342e-9■□□□□ 8.9
NCBP2P52298 GMPR2-208ENST00000558279 346 ntTSL 26.15□□□□□ -1.422e-9■□□□□ 8.9
NCBP2P52298 COA1-216ENST00000470156 569 ntTSL 1 (best)5.57□□□□□ -1.521e-7■□□□□ 8.9
NCBP2P52298 GMPR2-219ENST00000559409 601 ntTSL 35.41□□□□□ -1.542e-9■□□□□ 8.9
NCBP2P52298 COA1-207ENST00000420441 547 ntTSL 24.68□□□□□ -1.661e-7■□□□□ 8.9
NCBP2P52298 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.681e-7■□□□□ 8.9
NCBP2P52298 GMPR2-210ENST00000558701 402 ntTSL 33.52□□□□□ -1.852e-9■□□□□ 8.9
Retrieved 100 of 18,329 protein–RNA pairs in 393.4 ms